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Research ArticleExperimental Studies

The Role of SNPs in IL1RL1 and IL1RAP Genes in Age-related Macular Degeneration Development and Treatment Efficacy

ALVITA VILKEVICIUTE, NERINGA BASTIKAITYTE, RUTA MOCKUTE, DZASTINA CEBATORIENE, LORESA KRIAUCIUNIENE, JURATE BALCIUNIENE, REDA ZEMAITIENE and RASA LIUTKEVICIENE
In Vivo September 2020, 34 (5) 2443-2451; DOI: https://doi.org/10.21873/invivo.12059
ALVITA VILKEVICIUTE
1Neuroscience Institute, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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  • For correspondence: alvita.vilkeviciute@lsmuni.lt
NERINGA BASTIKAITYTE
2Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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RUTA MOCKUTE
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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DZASTINA CEBATORIENE
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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LORESA KRIAUCIUNIENE
1Neuroscience Institute, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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JURATE BALCIUNIENE
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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REDA ZEMAITIENE
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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RASA LIUTKEVICIENE
1Neuroscience Institute, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
3Department of Ophthalmology, Lithuanian University of Health Sciences, Medical Academy, Kaunas, Lithuania
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Abstract

Background: Age-related macular degeneration (AMD) affects the central part of the retina and causes blindness. In developed countries, AMD occurs in people over 50 years old. Important factors for AMD pathogenesis are an immune response, inflammation, and genetic factors. This study aimed to determine the impact of IL1RL1 rs1041973 and IL1RAP rs4624606 single nucleotide polymorphisms (SNPs) on the occurrence of AMD and the outcome of treatment with aflibercept and bevacizumab. Patients and Methods: 563 patients with AMD and 281 healthy candidates were evaluated. Patients with exudative AMD were treated with intravitreal bevacizumab and aflibercept and, after 6 months based on the changes in best-corrected visual acuity and central macular thickness, were classified as ‘responders’ or ‘poor-responders’. Genotyping of IL1RL1 rs1041973 and IL1RAP rs4624606 was accomplished using real-time PCR. Age was compared using the Mann-Whitney U-test. Categorical data (gender, genotype, and allele distributions) compared between groups using the χ2 test or the Fisher's exact test. Associations of gene polymorphisms were calculated using logistic regression analysis with adjustment for age in exudative and atrophic AMD analysis. An adjusted significance threshold for multiple comparisons α=0.025 was applied. Results: Statistically significant differences in the distribution of IL1RAP rs4624606 genotypes (TT, TA and AA) were found between males with atrophic AMD and controls: 50%, 42.9% and 7.1% vs. 69.7%, 30.3% and 0%, respectively, p=0.015. Moreover, we found that ‘responders’ had a significantly better best-corrected visual acuity than ‘poor-responders’ before treatment (p=0.032). The central macular thickness was significantly lower in exudative AMD patients with IL1RL1 rs1041973 AA genotype than in wild type and heterozygous (CC+CA) genotype carriers before treatment (p=0.017). Conclusion: IL1RAP rs4624606 may be associated with atrophic AMD in males while IL1RL1 rs1041973 may play a protective role against macular thickening in exudative AMD patients.

  • Age-related macular degeneration
  • IL1RL1 rs1041973
  • IL1RAP rs4624606
  • gene polymorphisms
  • treatment

Age-related macular degeneration (AMD), the leading cause of blindness in developed countries, is a complex disease caused entirely by environmental, demographic, and genetic factors (1, 2). AMD is classified into early or intermediate stages with the formation of drusen, an amorphous extracellular deposit in the retina, and characteristic pigmentary changes, and late stages, which may either be atrophic (geographic atrophy) or wet (neovascular type) (3). Early stages of the disease are often clinically asymptomatic. It progresses slowly and evolves into late AMD only in 10-20% of patients, of which two-thirds have neovascular and one-third atrophic AMD type (4). Late forms are characterized by the irreversible loss of central vision. Treatment in clinical practice is currently available only for the neovascular type: intraocular injections with VEGF inhibitors; there are no clinically approved treatment options for atrophic AMD and/or the possibility to stop early AMD forms developing to advanced AMD forms. Currently, an estimated 10.1 million people are living with AMD – projected global cases are 11.3, 14.9, and 18.6 million for 2020, 2030, and 2040, respectively (5).

In recent years, there has been growing evidence pointing to inflammatory processes and genetic components as having strong effects on AMD development (6-8). Knowledge of the molecular genetics of AMD has emerged mainly from analyses of DNA sequence and structural variations, with the large-scale genome-wide association studies (GWAS) reporting findings on the polygenic nature and incomplete penetrance of many common DNA variants associated with the disease (9, 10). Interleukin-1 receptor type I (IL1R1), also known as cluster of differentiation 121a (CD121a), is an interleukin receptor. IL1R1 also denotes its human gene. IL1RL1 has gained recognition due to its involvement in immune/inflammatory disorders (11). Interleukin-1 receptor accessory protein in humans is encoded by the IL1RAP gene. It has been shown that interleukin 1 induces synthesis of the acute phase and proinflammatory proteins during infection, tissue damage, or stress by forming a complex at the cell membrane with an interleukin 1 receptor and an accessory protein. The protein is a necessary part of the interleukin-1 receptor complex, which initiates signaling events that result in the activation of interleukin-1 responsive genes. Alternative splicing of this gene results in two transcript variants encoding two different isoforms, one membrane-bound and one soluble. The ratio of soluble to membrane-bound forms increases during acute-phase induction or stress (12). Madore et al. have found that the strongest gene-gene statistical interaction is between the IL1RAP and IL1R1 genes and it has the most biological relevance. These genes encode proteins that are associated with the regulation of the IL-1 receptor and the functionality of IL-1 (13). Indeed, IL-1R1 and IL-1RAP have been shown to form a protein complex with IL-1, and the interplay between these proteins may serve to unbalance the interaction between IL-1 and its signaling receptor (IL-1R1 and IL-1RAP) and its decoy receptor complex (IL-1R2 and IL-1RAP). Furthermore, it has been shown that inhibition of IL1R1 in mice with increased VEGF-A expression reduces severe degenerative and atrophic changes of the retinal pigment epithelium (RPE), thick basal laminar sub-RPE deposits, shortening of photoreceptor outer and inner segments, and attenuation of the photoreceptor outer nuclear layer (14). Also, we hypothesized that each individual's genetic variations can determine the exudative AMD treatment response to intravitreal injections and that identified genetic markers, predicting the differentiated response, may improve personalized medicine.

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Table I.

Demographic data of the studied groups.

Our research aimed to elucidate the possible involvement of IL1RL1 rs1041973 and IL1RAP rs4624606 gene polymorphisms in early and exudative AMD development in the Lithuanian population and analyze the outcome of exudative AMD treatment.

Patients and Methods

Patients and study design. The study was approved by the Ethics Committee for Biomedical Research, Lithuanian University of Health Sciences (No. BE-2-/13). A total of 897 individuals participated in this study: 270 patients with early AMD, 293 patients with exudative AMD, 53 patients with atrophic AMD, and the healthy control group consisted of 281 individuals (Table I). Participants were involved in our study according to previously published criteria (15). Study subjects underwent ophthalmological evaluation and general examination (15). DNA extraction and genotyping were performed as described in our previous publication (15). The distribution of males and females among the early, exudative and atrophic AMD and control groups did not differ statistically significantly (p=0.225, p=0.880 and p=0.213, respectively) (Table I). The age of controls matched the age of early AMD patients (p=0.065), but controls were younger than patients with exudative and atrophic AMD (p<0.001 for both) (Table I).

Exudative AMD treatment efficacy evaluation. Exudative AMD patients were treated with intraocular injections with VEGF inhibitors. Every 8 weeks, 2 mg of aflibercept and every 4 weeks 1.25 mg of bevacizumab (after three initial monthly injections) were given until choroidal neovascularization (CNV) was no longer active. Signs of active neovascularization were defined as fluid on OCT, new or persistent hemorrhage, decreased visual acuity as compared with the previous examination, or dye leakage or increased lesion size on fluorescein angiography. Best-corrected visual acuity (BCVA) and the central macular thickness were evaluated in 90 patients treated for exudative AMD. We chose to evaluate BCVA and central macular thickness changes before treatment and at 3 and 6 months after treatment. According to these data, we divided patients with exudative AMD into two subgroups: responders and poor-responders (Table I). ‘Poor-responders' had at least two of the three signs: persistence of submacular fluid, decreased visual acuity or increased central macular thickness (≥100 micrometers). ‘Responders’ did not have any of the mentioned signs.

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Table II.

The impact of IL1RL1 rs1041973 and IL1RAP rs4624606 on early age-related macular degeneration (AMD) development.

Statistical analysis. Statistical analysis was performed using the SPSS/W 20.0 software (Statistical Package for the Social Sciences for Windows, Inc., Chicago, Illinois, USA). Age is presented as median, minimum (min.) and maximum (max.) values and compared using the Mann-Whitney U-test. Categorical data (gender, genotype, and allele distributions) are presented as absolute numbers with percentages in brackets and compared between the early, exudative, and atrophic AMD and control groups using the χ2 test or the Fisher exact test.

Associations of gene polymorphisms were calculated using logistic regression analysis and present odds ratios (OR) with 95% confidence intervals (CI). Adjustment for age was done in exudative and atrophic AMD analysis. Due to multiple association calculations, we introduced an adjusted significance threshold for multiple comparisons α=0.025 (0.05/2, since we analyzed 2 different SNPs). The impact of genotypes is expressed as genetic models (codominant: heterozygotes versus wild type homozygotes and minor allele homozygotes versus wild type homozygotes; dominant: minor allele homozygotes and heterozygotes versus wild type homozygotes; recessive: minor allele homozygotes versus wild type homozygotes and heterozygotes; overdominant: heterozygotes versus wild type homozygotes and minor allele homozygotes; the additive model was used to evaluate the impact of each minor allele on AMD development). The selection of the best genetic model was based on the Akaike Information Criterion (AIC); therefore, the best genetic models were those with the lowest AIC values.

Results

Hardy-Weinberg equilibrium. We estimated the distributions of rs1041973 and rs4624606 genotypes in the control group using Hardy-Weinberg equilibrium (HWE). Both SNPs were in HWE (p>0.05) (Supplementary material).

IL1RL1 rs1041973 and IL1RAP rs4624606 analysis in AMD. We analyzed IL1RL1 rs1041973 and IL1RAP rs4624606 polymorphisms in the early, exudative, and atrophic AMD, and control groups. The analysis results did not reveal any differences between IL1RL1 rs1041973 and IL1RAP rs4624606 genotype and allele distributions in the early, exudative, and atrophic AMD groups (Supplementary material).

The binary logistic regression analysis showed that IL1RL1 rs1041973 CA genotype was associated with 1.4-fold increased odds of early AMD development (OR=1.426. CI=1.013-2.009, p=0.042) (Table II) and 1.9-fold increased odds of atrophic AMD development (OR=1.883. CI=1.011-3.507, p=0.046) (Table III); unfortunately, the results were not statistically significant according to the Bonferroni correction (p>0.025). No statistically significant associations were found in the exudative AMD group (Supplementary material).

IL1RL1 rs1041973 and IL1RAP rs4624606 analysis in AMD by gender. SNPs analysis performed by gender did not reveal any statistically significant associations in the early and exudative AMD groups (Supplementary material). Statistically significant differences in the distribution of IL1RAP rs4624606 genotypes (TT, TA an AA) were found between males with atrophic AMD and controls: 50%, 42.9% and 7.1% vs. 69.7%, 30.3% and 0%, respectively (p=0.015) (Table IV).

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Table III.

The impact of IL1RL1 rs1041973 and IL1RAP rs4624606 on atrophic age-related macular degeneration (AMD) development.

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Table IV.

Distributions of IL1RL1 rs1041973 and IL1RAP rs4624606 genotypes and alleles in control and atrophic age-related macular degeneration (AMD) groups by gender.

Exudative AMD treatment efficacy. We evaluated the treatment response of exudative AMD and differentiated patients into ‘responders’ and ‘poor-responders’. Best-corrected visual acuity (BCVA) and the macular thickness before treatment and after 3 and 6 months, as well as macular thickness changes after 6 months, were compared between ‘responders’ and ‘poor-responders’ (Table V). We found that before treatment, ‘responders’ had significantly better BCVA than ‘poor-responders’ (p=0.032) (Table V). None of the other parameters reached significant differences between the groups.

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Table V.

Best-corrected visual acuity and macular thickness in ‘responders’ and ‘poor-responders’.

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Table VI.

Associations between IL1RL1 rs1041973 and central macular thickness and best-corrected visual acuity.

In further analysis, we compared the distributions of IL1RL1 rs1041973 and IL1RAP rs4624606 genotypes and alleles between these two groups; however, there were no differences found (Supplementary material). On the other hand, we revealed the association between IL1RL1 rs1041973 homozygous minor allele carriers (AA) and the central macular thickness before treatment. The macular thickness was significantly lower in exudative AMD patients with AA genotype than in wild type and heterozygous (CC+CA) genotype carriers [median (IQR): 338 (95) vs. 251 (82), p=0.017] (Table VI). No associations were found between IL1RL1 rs1041973 and BCVA (Table VI). IL1RAP rs4624606 analysis showed no associations with the macular thickness or BCVA, which may be caused by a very small number of IL1RAP rs4624606 homozygous minor allele carriers (Supplementary material).

Discussion

To our knowledge, this is the first time that IL1RL1 rs1041973 and IL1RAP rs4624606 gene polymorphisms associations with early, exudative, and atrophic AMD development and exudative AMD treatment efficacy are analyzed.

Our results revealed that the IL1RL1 rs1041973 CA genotype was associated with 1.4-fold increased odds of early AMD development (p=0.042) and 1.9-fold increased odds of atrophic AMD development (p=0.046); however, the Bonferroni correction did not allow us to confirm this association as statistically significant. Also, we found that central macular thickness was significantly lower in exudative AMD patients with AA genotype than in wild type and heterozygous (CC+CA) genotype carriers before treatment [median (IQR): 338 (95) vs. 251 (82), p=0.017].

IL1RL1 is located in an interleukin 1 (IL1) receptor gene cluster on chromosome 2q12 (17). Human IL1RL1 encodes the receptor for interleukin-33 (IL33) and has three isoforms, including soluble IL1RL1 (IL1RL1-a), that can modify T helper cell responses by inhibition of IL33 signaling (18). IL1RL1-a can be induced by pro-inflammatory stimuli and appears to be essential for the normal function of T helper cells (17, 19). Serum levels of IL1RL1 were found elevated in atopic asthmatic patients during acute exacerbations (20). Marneros has analyzed the VEGF-a induced aging diseases of the eye and found that targeting NLRP3 inflammasome components or Il1r1 strongly inhibited both neovascular and non-exudative AMD-like pathologies (14). Other scientist groups have also proved that IL1RL1 genetic polymorphisms and IL1RL1-a serum levels are associated with severe arthritis, acute heart disease, and airway disease such as asthma (21-25). Also, studies are analyzing the association of other diseases, mostly asthma, with IL1RL1 gene polymorphisms. SNPs in IL1RL1 are associated with asthma-related phenotypes in three studies (26-28). Given the role of eosinophils in the pathogenesis of asthma, alleles that are associated with increased eosinophil count could be detrimental in terms of asthma risk and severity. In a GWAS of eosinophil count in an Icelandic population, an SNP in IL1RL1 (rs1420101) showed the most significant association. The A allele of rs1420101 is associated with an increased eosinophil count and, in further analyses, with increased serum IgE as well as with three asthma phenotypes (asthma, atopic asthma, nonatopic asthma) in nine European populations and one East Asian population (28).

Two (rs1041973 and rs10206753) of the four coding non-synonymous IL1RL1 SNPs, associated with asthma in the Mexican population, were also examined in a Dutch population where they showed no associations (26).

Another gene we evaluated in patients with AMD was IL1RAP rs4624606. IL1RAP is commonly known to be the co-receptor for the IL-1 receptor and it is required to transduce IL-1 signaling, leading to pro-inflammatory gene expression and cell survival (29). The IL-1RAcP gene is located on chromosome 3q28 (30).

Furthermore, Theodoropoulou et al. have demonstrated that IL-1 receptor accessory protein (IL1RAP) is expressed by cells in the murine retina and retinal pigment epithelium (RPE). They have sought to determine whether similar expression profiles were present in healthy human ocular tissue and revealed robust expression of IL1RAP in the nerve fiber layer of the inner retina and the RPE (31). In our study, we found statistically significant differences in the distribution of IL1RAP rs4624606 genotypes (TT, TA an AA) between males with atrophic AMD and controls: 50%, 42.9% and 7.1% vs. 69.7%, 30.3% and 0%, respectively (p=0.015).

In large genome-wide case-control studies, IL1RAP was found to be associated with Alzheimer's disease (32). The same gene polymorphism was analyzed in patients with cardiovascular heart disease risk by Wu and colleagues (33). The study has shown that rs46246 is nominally associated with CHD risk. The AA genotype was associated with a 1.85-fold increased risk of CHD (p=0.045) compared to the TT genotype. Further analysis showed that AA carriers also had a higher risk of CHD than TT+TA carriers [odds ratio (p =0.043)] (33).

Genetic variants in IL-1RAcP have been associated with prostate cancer, Kawasaki disease, and persistent hepatitis B virus (33-36). Menon et al. have also reported that rs4624606 was associated with higher amniotic fluid-1β concentrations (37). IL1RAP may also play a role in acute myeloid leukemia (AML) as well as in high-risk myelodysplastic syndromes, hematologic malignancies that often progress to AML (38-41).

Conclusion

Our results showed that IL1RL1 rs1041973 and IL1RAP rs4624606 gene polymorphisms may not play a role in early and exudative AMD development but IL1RAP rs4624606 may be associated with atrophic AMD in males. Also, IL1RL1 rs1041973 gene polymorphism possibly plays a protective role against macular thickening in exudative AMD patients. Further research should focus on determining the IL1RL1 and IL1RAP protein expression associations with AMD development.

Footnotes

  • Authors' Contributions

    Conceptualization, A.V., N.B., L.K., R.Z., and R.L.; Methodology, A.V., N.B., R.M., D.C., L.K., and R.L.; Formal Analysis, A.V., N.B., L.K., D.C., J.B., R.Z., and R.L.; Investigation, A.V., N.B., L.K., R.M., D.C., J.B., R.Z., and R.L.; Data Curation, A.V., N.B., R.M., D.C., J.B., R.Z., and R.L.; Writing – Original Draft Preparation, A.V., N.B., D.C., R.M., L.K., R.Z., J.B., and R.L.; Writing – Review & Editing, N. B., A.V., and R.L; Supervision, R.L.

  • This article is freely accessible online.

  • Data Availability

    The genotyping and ophthalmological test data used to support the findings of this study are available from the corresponding author upon request.

  • Supplementary Material

    Available at: https://docs.google.com/document/d/1gTl2gNFba2TD6z5nIvtAV_TPJjTEwmHAzPrr_hQsyw0/edit

  • Conflicts of Interest

    None of the Authors has any proprietary interests or conflicts of interest related to this submission.

  • Received June 16, 2020.
  • Revision received July 6, 2020.
  • Accepted July 7, 2020.
  • Copyright© 2020, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved

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In Vivo: 34 (5)
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September-October 2020
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The Role of SNPs in IL1RL1 and IL1RAP Genes in Age-related Macular Degeneration Development and Treatment Efficacy
ALVITA VILKEVICIUTE, NERINGA BASTIKAITYTE, RUTA MOCKUTE, DZASTINA CEBATORIENE, LORESA KRIAUCIUNIENE, JURATE BALCIUNIENE, REDA ZEMAITIENE, RASA LIUTKEVICIENE
In Vivo Sep 2020, 34 (5) 2443-2451; DOI: 10.21873/invivo.12059

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The Role of SNPs in IL1RL1 and IL1RAP Genes in Age-related Macular Degeneration Development and Treatment Efficacy
ALVITA VILKEVICIUTE, NERINGA BASTIKAITYTE, RUTA MOCKUTE, DZASTINA CEBATORIENE, LORESA KRIAUCIUNIENE, JURATE BALCIUNIENE, REDA ZEMAITIENE, RASA LIUTKEVICIENE
In Vivo Sep 2020, 34 (5) 2443-2451; DOI: 10.21873/invivo.12059
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